Package: bedrockbio 2.0.0

Liam Abbott

bedrockbio: Open-Access Computational Biology Datasets

Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.

Authors:Liam Abbott [aut, cre, cph]

bedrockbio_2.0.0.tar.gz
bedrockbio_2.0.0.tgz(r-4.6-any)bedrockbio_2.0.0.tgz(r-4.5-any)
bedrockbio_2.0.0.tar.gz(r-4.7-any)bedrockbio_2.0.0.tar.gz(r-4.6-any)
bedrockbio_2.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
bedrockbio/json (API)

# Install 'bedrockbio' in R:
install.packages('bedrockbio', repos = c('https://r-multiverse-staging.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bedrock-bio/bedrock-bio-client/issues

On CRAN:

Conda:

2.62 score 1 stars 12 scripts 205 downloads 5 exports 26 dependencies

Last updated from:5b2e436280. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK119
source / vignettesOK188
linux-releaseOK129
macos-releaseOK118
macos-oldrelOK114
windows-develOK55
windows-releaseOK75
windows-oldrelOK52
wasm-releaseOK110

Exports:describe_namespacedescribe_tablelist_namespaceslist_tablesload_table

Dependencies:blobclicpp11curlDBIdbplyrdplyrduckdbgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr