Package: bedrockbio 1.3.0

Liam Abbott

bedrockbio: Open-Access Computational Biology Datasets

Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.

Authors:Liam Abbott [aut, cre, cph]

bedrockbio_1.3.0.tar.gz
bedrockbio_1.1.0.zip(r-4.6)bedrockbio_1.1.0.zip(r-4.5)
bedrockbio_1.3.0.tgz(r-4.6-any)bedrockbio_1.3.0.tgz(r-4.5-any)
bedrockbio_1.3.0.tar.gz(r-4.7-any)bedrockbio_1.3.0.tar.gz(r-4.6-any)
bedrockbio_1.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
bedrockbio/json (API)
NEWS

# Install 'bedrockbio' in R:
install.packages('bedrockbio', repos = c('https://staging.r-multiverse.org', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bedrock-bio/bedrock-bio-client/issues

On CRAN:

Conda:

2.38 score 1 stars 12 scripts 214 downloads 3 exports 26 dependencies

Last updated from:904aaf94d6. Checks:8 OK, 1 FAIL. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK343
source / vignettesOK190
linux-release-x86_64OK161
macos-release-arm64FAIL69
macos-oldrel-arm64OK105
windows-develOK893
windows-releaseOK132
windows-oldrelOK52
wasm-releaseOK117

Exports:describe_tablelist_tablesload_table

Dependencies:blobclicpp11curlDBIdbplyrdplyrduckdbgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr